Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Atp Synthesis Coupled Electron Transport (GO:0042773) Genes Targeted by hsa-mir-487a in MPM Mesothelioma Gordon Cluster 36 Table contains all genes in the MPM Mesothelioma Gordon cluster number 36. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-487a GO:0042773 84084 RAB6C RAB6C, member RAS oncogene family [Source:HGNC Symbol;Acc:16525] T 10179 RBM7 RNA binding motif protein 7 [Source:HGNC Symbol;Acc:9904] P T 27069 GHITM growth hormone inducible transmembrane protein [Source:HGNC Symbol;Acc:17281] zzz999 7802 DNALI1 dynein, axonemal, light intermediate chain 1 [Source:HGNC Symbol;Acc:14353] zzz999 7296 zzz999 zzz999 T 128 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:253] zzz999 55858 TMEM165 transmembrane protein 165 [Source:HGNC Symbol;Acc:30760] T 23678 SGK3 serum/glucocorticoid regulated kinase family, member 3 [Source:HGNC Symbol;Acc:10812] T 55863 TMEM126B transmembrane protein 126B [Source:HGNC Symbol;Acc:30883] zzz999 5464 PPA1 pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:9226] zzz999 3417 IDH1 isocitrate dehydrogenase 1 (NADP+), soluble [Source:HGNC Symbol;Acc:5382] zzz999 10427 SEC24B SEC24 family, member B (S. cerevisiae) [Source:HGNC Symbol;Acc:10704] zzz999 26273 FBXO3 F-box protein 3 [Source:HGNC Symbol;Acc:13582] zzz999 4711 NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa [Source:HGNC Symbol;Acc:7700] zzz999 Yes 372 ARCN1 archain 1 [Source:HGNC Symbol;Acc:649] P T 4780 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 [Source:HGNC Symbol;Acc:7782] zzz999 8895 CPNE3 copine III [Source:HGNC Symbol;Acc:2316] T 51315 KRCC1 lysine-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28039] T 6451 SH3BGRL SH3 domain binding glutamic acid-rich protein like [Source:HGNC Symbol;Acc:10823] T 4077 NBR1 neighbor of BRCA1 gene 1 [Source:HGNC Symbol;Acc:6746] zzz999 10241 CALCOCO2 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:29912] zzz999 57003 CCDC47 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:24856] zzz999 6450 SH3BGR SH3 domain binding glutamic acid-rich protein [Source:HGNC Symbol;Acc:10822] zzz999 1182 CLCN3 chloride channel 3 [Source:HGNC Symbol;Acc:2021] T 22841 RAB11FIP2 RAB11 family interacting protein 2 (class I) [Source:HGNC Symbol;Acc:29152] T 55108 BSDC1 BSD domain containing 1 [Source:HGNC Symbol;Acc:25501] zzz999 26128 KIAA1279 KIAA1279 [Source:HGNC Symbol;Acc:23419] zzz999 6342 SCP2 sterol carrier protein 2 [Source:HGNC Symbol;Acc:10606] T 9559 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711] T 10007 GNPDA1 glucosamine-6-phosphate deaminase 1 [Source:HGNC Symbol;Acc:4417] zzz999 147339 C18orf25 chromosome 18 open reading frame 25 [Source:HGNC Symbol;Acc:28172] P T 9367 RAB9A RAB9A, member RAS oncogene family [Source:HGNC Symbol;Acc:9792] zzz999 10269 ZMPSTE24 zinc metallopeptidase (STE24 homolog, S. cerevisiae) [Source:HGNC Symbol;Acc:12877] zzz999 509 ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 [Source:HGNC Symbol;Acc:833] zzz999 4729 NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] zzz999 Yes 54981 C9orf95 chromosome 9 open reading frame 95 [Source:HGNC Symbol;Acc:26057] zzz999 80232 WDR26 WD repeat domain 26 [Source:HGNC Symbol;Acc:21208] zzz999 54969 C4orf27 chromosome 4 open reading frame 27 [Source:HGNC Symbol;Acc:26051] zzz999 10476 ATP5H ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] zzz999 22920 KIFAP3 kinesin-associated protein 3 [Source:HGNC Symbol;Acc:17060] zzz999 329 BIRC2 baculoviral IAP repeat containing 2 [Source:HGNC Symbol;Acc:590] zzz999 51375 SNX7 sorting nexin 7 [Source:HGNC Symbol;Acc:14971] zzz999 55146 ZDHHC4 zinc finger, DHHC-type containing 4 [Source:HGNC Symbol;Acc:18471] zzz999 79072 FASTKD3 FAST kinase domains 3 [Source:HGNC Symbol;Acc:28758] zzz999 81853 TMEM14B transmembrane protein 14B [Source:HGNC Symbol;Acc:21384] zzz999 26091 HERC4 hect domain and RLD 4 [Source:HGNC Symbol;Acc:24521] zzz999 7555 CNBP CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164] zzz999 25874 BRP44 brain protein 44 [Source:HGNC Symbol;Acc:24515] zzz999 5193 PEX12 peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:8854] zzz999 9897 KIAA0196 KIAA0196 [Source:HGNC Symbol;Acc:28984] zzz999 7251 TSG101 tumor susceptibility gene 101 [Source:HGNC Symbol;Acc:15971] zzz999 259230 SGMS1 sphingomyelin synthase 1 [Source:HGNC Symbol;Acc:29799] zzz999 8036 SHOC2 soc-2 suppressor of clear homolog (C. elegans) [Source:HGNC Symbol;Acc:15454] T 9917 FAM20B family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] zzz999 6934 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:HGNC Symbol;Acc:11641] zzz999 28972 SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23401] zzz999 22875 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) [Source:HGNC Symbol;Acc:3359] T 80306 MED28 mediator complex subunit 28 [Source:HGNC Symbol;Acc:24628] T 10477 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12479] zzz999 873 CBR1 carbonyl reductase 1 [Source:HGNC Symbol;Acc:1548] zzz999 116832 RPL39L ribosomal protein L39-like [Source:HGNC Symbol;Acc:17094] zzz999 716 C1S complement component 1, s subcomponent [Source:HGNC Symbol;Acc:1247] T 8804 CREG1 cellular repressor of E1A-stimulated genes 1 [Source:HGNC Symbol;Acc:2351] zzz999 9320 TRIP12 thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:12306] zzz999 1429 CRYZ crystallin, zeta (quinone reductase) [Source:HGNC Symbol;Acc:2419] zzz999 10040 TOM1L1 target of myb1 (chicken)-like 1 [Source:HGNC Symbol;Acc:11983] zzz999 80114 BICC1 bicaudal C homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:19351] zzz999 51019 CCDC53 coiled-coil domain containing 53 [Source:HGNC Symbol;Acc:24256] zzz999 4717 NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa [Source:HGNC Symbol;Acc:7705] zzz999 Yes 80218 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:HGNC Symbol;Acc:29533] T 10542 HBXIP hepatitis B virus x interacting protein [Source:HGNC Symbol;Acc:17955] zzz999 8802 SUCLG1 succinate-CoA ligase, alpha subunit [Source:HGNC Symbol;Acc:11449] zzz999 51652 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29865] T 55272 IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:HGNC Symbol;Acc:14497] zzz999 10935 PRDX3 peroxiredoxin 3 [Source:HGNC Symbol;Acc:9354] zzz999 51100 SH3GLB1 SH3-domain GRB2-like endophilin B1 [Source:HGNC Symbol;Acc:10833] zzz999 51182 HSPA14 heat shock 70kDa protein 14 [Source:HGNC Symbol;Acc:29526] zzz999 9653 HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5193] T 1738 DLD dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:2898] zzz999 Yes 5019 OXCT1 3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527] zzz999 55827 DCAF6 DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:30002] zzz999 6647 SOD1 superoxide dismutase 1, soluble [Source:HGNC Symbol;Acc:11179] zzz999 4801 NFYB nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805] T 4718 NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa [Source:HGNC Symbol;Acc:7706] zzz999 Yes 286451 YIPF6 Yip1 domain family, member 6 [Source:HGNC Symbol;Acc:28304] zzz999 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] zzz999 Yes 55031 USP47 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:20076] T 10384 BTN3A3 butyrophilin, subfamily 3, member A3 [Source:HGNC Symbol;Acc:1140] zzz999 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] T 7265 TTC1 tetratricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:12391] zzz999 5311 PKD2 polycystic kidney disease 2 (autosomal dominant) [Source:HGNC Symbol;Acc:9009] T 27332 ZNF638 zinc finger protein 638 [Source:HGNC Symbol;Acc:17894] P T 27430 MAT2B methionine adenosyltransferase II, beta [Source:HGNC Symbol;Acc:6905] zzz999 310 ANXA7 annexin A7 [Source:HGNC Symbol;Acc:545] zzz999 6832 SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11471] zzz999 55032 SLC35A5 solute carrier family 35, member A5 [Source:HGNC Symbol;Acc:20792] zzz999 7360 UGP2 UDP-glucose pyrophosphorylase 2 [Source:HGNC Symbol;Acc:12527] zzz999 8872 CDC123 cell division cycle 123 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16827] zzz999 27236 ARFIP1 ADP-ribosylation factor interacting protein 1 [Source:HGNC Symbol;Acc:21496] zzz999 23506 KIAA0240 KIAA0240 [Source:HGNC Symbol;Acc:21111] zzz999 253725 FAM21C family with sequence similarity 21, member C [Source:HGNC Symbol;Acc:23414] zzz999 8649 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] zzz999 5360 PLTP phospholipid transfer protein [Source:HGNC Symbol;Acc:9093] zzz999 55847 CISD1 CDGSH iron sulfur domain 1 [Source:HGNC Symbol;Acc:30880] zzz999 9403 zzz999 zzz999 zzz999 55763 EXOC1 exocyst complex component 1 [Source:HGNC Symbol;Acc:30380] zzz999 3188 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') [Source:HGNC Symbol;Acc:5042] P T

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